Yan Shi, Huimin Xu, Qiaochu Shen, Jingxian Lin, Yongjun Wang...JisenZhang*(2019).Comparative Analysis of SUS Gene Family between Saccharum officinarum and Saccharum spontaneum. .Tropical Plant Biology.DOI: 10.1007/s12042-019-09230-6

Zhen Li, Xiuting Hua, Weiming Zhong, Yuan Yuan...JisenZhang*(2019)Genome-Wide Identification and Expression Profile Analysis of WRKY Family Genes in the Autopolyploid Saccharum spontaneum. Plant and Cell Physiology.DOI: 10.1093/pcp/pcz227

Gang Wang, Jingxian Lin, Yang Shi, Xiaoguang Chang...JisenZhang*(2019)Mitochondrial genome in Hypsizygus marmoreus and its evolution in Dikarya. BMC Genomics.DOI: 10.1186/s12864-019-6133-z

Panpan Ma, Yuan Yuan, Qiaochu Shen, Qing Jiang, Xiuting Hua ,...JisenZhang*(2019) .Evolution and Expression Analysis of Starch Synthase Gene Families in Saccharum spontaneum.Tropical Plant Biology.DOI: 10.1007/s12042-019-09225-3

Yongjun Wang, Xiuting Hua, Jingsheng Xu, Zhichang Chen, ...JisenZhang*(2019) Comparative genomics revealed the gene evolution and functional divergence of magnesium transporter families in Saccharum. BMC Genomics.DOI: 10.1186/s12864-019-5437-3

Duo Chen, Qing Zhang, Weiqi Tang, Zhen Huang,...JisenZhang*(2020) The evolutionary origin and domestication history of goldfish (Carassius auratus). PNAS.DOI: 10.1073/pnas.2005545117

Qing Zhang, Xiuting Hua, Hong Liu, Yuan Yuan,...JisenZhang*(2020) Evolutionary expansion and functional divergence of sugar transporters in Saccharum (S. spontaneum and S. officinarum) The Plant Journal.DOI: 10.1111/tpj.15076

Panpan Ma, Xingtan Zhang, Lanping Chen, Qian Zhao,...JisenZhang*(2020) Comparative analysis of sucrose phosphate synthase (SPS) gene family between Saccharum officinarum and Saccharum spontaneum. BMC Plant Biology.DOI: 10.1186/s12870-020-02599-7

Gang Wang, Lianfu Chen , Weiqi Tang , Yuanyuan Wang,...JisenZhang*(2021) Identifying a melanogenesis-related candidate gene by a high-quality genome assembly and population diversity analysis in Hypsizygus marmoreus..DOI: doi.org/10.1016/j.jgg.2021.01.002

Zhen Li, Gang Wang, Xihui Liu, Zhengchao Wang,...JisenZhang*(2021). Genome-wide identification and expression profiling of DREB genes in Saccharum spontaneum. BMC Genomics.DOI: 10.1186/s12864-021-07799-5

Tianyou Wang, Jingping Fang & Jisen Zhang(2021).. AdvanceAdvances in Sugarcane Genomics and Geneticss in Sugarcane Genomics and Genetics. Sugar Tech.DOI: https://doi.org/10.1007/s12355-021-01065-4

Gang Wang, Yuanyuan Wang, Lianfu Chen, Hongbo Wang,...JisenZhang*(2021). Genetic structure and evolutionary diversity of mating-type (MAT) loci in Hypsizygus marmoreus. IMA Fungus.DOI: 10.1186/s43008-021-00086-8.

Baiyu Wang Wenshun Hu, Yaxue Fang, Xiaoxi Feng,...JisenZhang*(2022). Comparative Analysis of the MADS-Box Genes Revealed Their Potential Functions for Flower and Fruit Development in Longan (Dimocarpus longan). Frontiers in Plant Science.DOI: doi.org/10.3

Qing Zhang, Yiying Qi, Haoran Pan, Haibao Tang, Gang Wang, Xiuting Hua,...JisenZhang*（2022）Genomic insights into the recent chromosome reduction of autopolyploid sugarcane Saccharum spontaneum. Natue Genomic.DOI: doi.org/10.1038/s41588-022-01084-1.

Xiuting Hua, Qiaochu Shen, Yihan Li, Dong Zhou,...JisenZhang*（2022）Functional characterization and analysis of transcriptional regulation of sugar transporter SWEET13c in sugarcane Saccharum spontaneum. BMC Plant Biology.DOI: doi.org/10.1186/s12870-022-03

LIU Lei , WANG Heng-bo , LI Yi-han , CHEN Shu-qi,...JisenZhang*（2022）Genome-wide development of interspecific microsatellite markers for Saccharum officinarum and Saccharum spontaneum. Journal of Integrative Agriculture.DOI: 10.1016/j.jia.2022.08.129.

Yihan Li ,Yongjun Wang ,Xiaoxi Feng ,Xiuting Hua, ...JisenZhang*（2022）Expression Profiling and MicroRNA Regulatory Networks of Homeobox Family Genes in Sugarcane Saccharum spontaneum L. International Journal of Molecular Sciences.DOI: 10.1016/j.jia.2022.0

Yongjun Wang ,Yihan Li ,Xiuting Hua ,Zhe Zhang, ...JisenZhang*（2022）Transcriptome Dynamics Underlying Magnesium Deficiency Stress in Three Founding Saccharum Species . International Journal of Molecular Sciences.DOI: doi.org/10.3390/ijms23179681

Huakun Zheng,Baiyu Wang,Xiuting,Hua ,Ruiting Gao,...JisenZhang*（2023）A near-complete genome assembly of the allotetrapolyploid Cenchrus fungigraminus (JUJUNCAO) provides insights into its evolution and C4 photosynthesis. Plant communication.DOI: 10.1016/j

Tianyou Wang, Baiyu Wang, Xiuting Hua, Haibao Tang, ...JisenZhang*（2023）A complete gap-free diploid genome in Saccharum complex and the genomic footprints of evolution in the highly polyploid Saccharum genus.Nature Plants. DOI: 10.1038/s41477-023-01378-0

Qing Jiang, Xiuting Hua, Huihong Shi, Jia Liu, ...JisenZhang*（2023）Transcriptome dynamics provides insights into divergences of photosynthesis pathway between Saccharum officinarum and Saccharum spontaneum. The Plant Journal. DOI: 10.1111/tpj.16110

Yongjun Wang, Xiuting Hua, Jingsheng Xu, Zhichang Chen,....Jisen Zhang*(2019).Comparative Genomics revealed the Gene Evolution and Functional Divergence of Magnesium Transporter Families in Saccharum. BMC Genomics. DOI: 10.1186/s12864-019-5437-3.

Weichang Hu#; Xiuting Hua#; Qing Zhang; Jianping Wang; ...Jisen Zhang*(2018).New Insights into the Evolution and Functional Divergence of the SWEET family in Saccharum Based on Comparative Genomics. BMC Plant Biology. DOI: 10.1186/s12870-018-1495-y

Jisen Zhang†*, Xingtan Zhang†, Haibao Tang†, Qing Zhang†, Xiuting Hua...et al., Chifumi Nagai*, Ray Ming*(2018).Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L..Nature Genetics, doi.org/10.1038/s41588-018-0237-2

Huimin Xu, Qingyi Yu, Yan Shi, Xiuting Hua, Haibao Tang, Long Yang*, Ray Ming*, and Jisen Zhang*. (2018) PGD: Pineapple Genomics Database. Horticulture Research. 5:66 :DOI: 10.1038/s41438-018-0078-2

Zhang Jisen, Zhang Qing, Li Leiting, Tang Haibao, Zhang Qiong, Chen Yang, Arro Jie, Zhang Xingtan, Wang Aiqin, Miao Chenyong, Ming Ray*. (2018) Recent Polyploidization Events in Three Saccharum Founding Species. Plant Biotechnology Journal.

Xiping Yang, Jian Song, James Todd, Ze Peng, ..., Jisen Zhang,*.(2018) Target enrichment sequencing of 307 germplasm accessions identified ancestry of ancient and modern hybrids and signatures ...genomes. Plant Biotechnology Journal.

Guangrui Dong, Jiao Shen, Qing Zhang, ...and Jisen Zhang*.(2018) Development and applications of chromosome-specific cytogenetic BAC-FISH probes in S. spontaneum. Frontiers in Plant Science. doi: 10.3389/fpls.2018.00218 ​

Fan Zhu, Ching Man Wai, Jisen Zhang,...*. (2018) Differential expression of hormone related genes between extreme segregants of a Saccharum interspecific F2 population. 2018.Euphytica 214(3).DOI:10.1007/s10681-018-2137-z. ​

Huiling Liu, Xiping Yang, Qian You,Jisen Zhang,...*. (2018) Pedigree, marker recruitment, and genetic diversity of modern sugarcane cultivars in China and the United States. Euphytica. 214:48 https://doi.org/10.1007/s10681-018-2127-1.